STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0XZL5Os11g0157000 protein. (141 aa)    
Predicted Functional Partners:
A0A0P0XK57
Os09g0248000 protein.
    
 0.893
Q6Z0F0_ORYSJ
cDNA clone:J033001O09, full insert sequence.
    
 0.893
Q60ES2_ORYSJ
cDNA clone:J013090A11, full insert sequence.
   
 
 0.881
Q6F378_ORYSJ
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor.
  
  
 
0.835
Q0D7K3_ORYSJ
cDNA clone:J013114K24, full insert sequence.
  
  
 
0.812
A0A0P0WFI1
Os04g0636700 protein.
    
 
 0.792
A0A0P0XYW8
Os11g0130100 protein.
    
 
 0.792
Q2QYA2_ORYSJ
Os12g0126800 protein.
    
 
 0.792
Q5JKG7_ORYSJ
cDNA clone:J033143H08, full insert sequence.
    
 
 0.792
Q0JB94_ORYSJ
Os04g0548300 protein.
   
 
  0.751
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.