Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0VBC1 | A0A0P0VD80 | A0A0P0VBC1 | A0A0P0VD80 | Os01g0889200 protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.741 |
A0A0P0VBC1 | A0A0P0W0R9 | A0A0P0VBC1 | A0A0P0W0R9 | Os01g0889200 protein. | Os03g0609200 protein. | 0.989 |
A0A0P0VBC1 | A0A0P0W9L1 | A0A0P0VBC1 | A0A0P0W9L1 | Os01g0889200 protein. | Os04g0394500 protein. | 0.540 |
A0A0P0VBC1 | A0A0P0X0W6 | A0A0P0VBC1 | A0A0P0X0W6 | Os01g0889200 protein. | Os06g0697400 protein. | 0.989 |
A0A0P0VBC1 | A0A0P0X1I6 | A0A0P0VBC1 | A0A0P0X1I6 | Os01g0889200 protein. | Os07g0105100 protein. | 0.947 |
A0A0P0VBC1 | A0A0P0XVR4 | A0A0P0VBC1 | A0A0P0XVR4 | Os01g0889200 protein. | Os10g0495600 protein; Belongs to the RNA polymerase beta chain family. | 0.950 |
A0A0P0VBC1 | A0A0P0Y0H6 | A0A0P0VBC1 | A0A0P0Y0H6 | Os01g0889200 protein. | Os11g0218200 protein. | 0.540 |
A0A0P0VBC1 | A0A0P0Y7J1 | A0A0P0VBC1 | A0A0P0Y7J1 | Os01g0889200 protein. | Os12g0180400 protein. | 0.977 |
A0A0P0VBC1 | B7EQI7_ORYSJ | A0A0P0VBC1 | B7EQI7 | Os01g0889200 protein. | cDNA clone:J023098I05, full insert sequence. | 0.977 |
A0A0P0VBC1 | B9GDH8_ORYSJ | A0A0P0VBC1 | B9GDH8 | Os01g0889200 protein. | Os12g0533600 protein. | 0.539 |
A0A0P0VD80 | A0A0P0VBC1 | A0A0P0VD80 | A0A0P0VBC1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os01g0889200 protein. | 0.741 |
A0A0P0VD80 | A0A0P0W0R9 | A0A0P0VD80 | A0A0P0W0R9 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os03g0609200 protein. | 0.669 |
A0A0P0VD80 | A0A0P0W9L1 | A0A0P0VD80 | A0A0P0W9L1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os04g0394500 protein. | 0.741 |
A0A0P0VD80 | A0A0P0X0W6 | A0A0P0VD80 | A0A0P0X0W6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os06g0697400 protein. | 0.972 |
A0A0P0VD80 | A0A0P0X1I6 | A0A0P0VD80 | A0A0P0X1I6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os07g0105100 protein. | 0.890 |
A0A0P0VD80 | A0A0P0XVR4 | A0A0P0VD80 | A0A0P0XVR4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os10g0495600 protein; Belongs to the RNA polymerase beta chain family. | 0.986 |
A0A0P0VD80 | A0A0P0Y0H6 | A0A0P0VD80 | A0A0P0Y0H6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os11g0218200 protein. | 0.540 |
A0A0P0VD80 | A0A0P0Y7J1 | A0A0P0VD80 | A0A0P0Y7J1 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os12g0180400 protein. | 0.963 |
A0A0P0VD80 | B7EQI7_ORYSJ | A0A0P0VD80 | B7EQI7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:J023098I05, full insert sequence. | 0.973 |
A0A0P0VD80 | B9GDH8_ORYSJ | A0A0P0VD80 | B9GDH8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os12g0533600 protein. | 0.733 |
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