Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0Y3B4 | SPO11-2 | A0A0P0Y3B4 | Q6ZD95 | Os11g0545300 protein. | Meiotic recombination protein SPO11-2; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (By similarity); Belongs to the TOP6A family. | 0.456 |
A0A0P0Y3B4 | SPO11-3 | A0A0P0Y3B4 | Q0DSV9 | Os11g0545300 protein. | Topoisomerase 6 subunit A3; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (By similarity). | 0.473 |
A0A0P0Y3B4 | SPO11-4 | A0A0P0Y3B4 | Q2QM00 | Os11g0545300 protein. | Meiotic recombination protein SPO11-4; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. Possesses double-stranded DNA cleavage activity in vitro. | 0.472 |
SPO11-2 | A0A0P0Y3B4 | Q6ZD95 | A0A0P0Y3B4 | Meiotic recombination protein SPO11-2; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination (By similarity); Belongs to the TOP6A family. | Os11g0545300 protein. | 0.456 |
SPO11-3 | A0A0P0Y3B4 | Q0DSV9 | A0A0P0Y3B4 | Topoisomerase 6 subunit A3; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (By similarity). | Os11g0545300 protein. | 0.473 |
SPO11-4 | A0A0P0Y3B4 | Q2QM00 | A0A0P0Y3B4 | Meiotic recombination protein SPO11-4; Required for meiotic recombination. Mediates DNA cleavage that forms the double-strand breaks (DSB) that initiate meiotic recombination. Possesses double-stranded DNA cleavage activity in vitro. | Os11g0545300 protein. | 0.472 |