STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0Y3N3Os11g0578200 protein. (168 aa)    
Predicted Functional Partners:
A0A0N7KI10
Os03g0741700 protein.
  
 
 0.956
A0A0P0W0F9
Os03g0632800 protein.
  
 
 0.954
A0A0P0YDE7
Os12g0600200 protein.
    
 0.940
Q10C16_ORYSJ
Zinc finger, C3HC4 type family protein, expressed.
    
 0.940
A0A0P0YAR1
Os12g0479100 protein.
    
 0.921
LAX2
Protein LAX PANICLE 2; Involved in the regulation of shoot branching by controlling axillary meristem (AM) formation. Functions in association with LAX1 to regulate the process of AM formation. Possesses transactivation activity in yeast.
    
 0.921
Q5JK41_ORYSJ
Os01g0928400 protein.
    
 0.921
FIE1
Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Together with EZ1 and CLF forms a complex that is involved in gene transcriptional repression by trimethylation on histone H3 'Lys-27' (H3K27me3) of target g [...]
    
 0.820
FIE2
Polycomb group protein FIE1; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Involved in the regulation of seed endosperm development, grain filling and seed dormancy. FIE2-containing PcG complex in seed endosperm regulates the expres [...]
    
 0.820
EMF2A
Polycomb group protein EMF2A; Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They act via the methylation of histones, rendering chromatin heritably changed in its expressibility.
    
 0.794
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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