STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0Y4R2Os11g0638700 protein. (746 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
   
 0.816
Q2R0M2_ORYSJ
Leucine Rich Repeat family protein, expressed.
      
 0.611
Os11g0638900
Armadillo-type fold domain containing protein.
    
 
 0.590
A0A0P0XQE9
Os09g0512450 protein.
    
 0.579
Q6K9N9_ORYSJ
cDNA clone:J023012G01, full insert sequence.
    
 0.579
A0A0P0Y4S5
Os11g0639000 protein.
    
 
 0.576
Q0IRF0_ORYSJ
Os11g0641300 protein.
      
 0.571
A0A0P0WLY1
Os05g0392000 protein.
   
  0.567
A0A0P0WM13
Os05g0392050 protein.
   
  0.567
A0A0P0Y4P9
Os11g0641200 protein.
      
 0.566
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.