STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A3CAY2_ORYSJOs11g0434400 protein. (406 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
    
 0.811
KIN14I
Kinesin-like protein KIN-14I; Minus-end microtubule-dependent motor protein involved in the regulation of cell division.
   
 0.763
BSL1
Serine/threonine-protein phosphatase BSL1 homolog.
    
 0.677
Q8RZZ3_ORYSJ
Serine/threonine-protein phosphatase.
    
 0.642
A0A0P0UZD9
Os01g0188900 protein.
  
 
  0.626
Q5VQZ7_ORYSJ
cDNA clone:J033087A12, full insert sequence.
  
 
  0.617
Q53NW5_ORYSJ
Skp1 family, tetramerisation domain containing protein, expressed; Belongs to the SKP1 family.
    
 0.602
A0A0P0V586
Os01g0616333 protein.
    
 0.597
A0A0P0XQE9
Os09g0512450 protein.
   
 0.597
Q0DJZ3_ORYSJ
Os05g0210600 protein.
    
 0.597
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.