STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7EFH6_ORYSJcDNA clone:J013168N22, full insert sequence. (417 aa)    
Predicted Functional Partners:
A0A0P0XD52
Os08g0217200 protein.
  
     0.516
A0A0P0YAL7
Os12g0521300 protein.
  
     0.516
C7IYE5_ORYSJ
Os02g0801700 protein.
  
     0.507
A0A0P0WLF8
Os05g0368800 protein.
  
     0.503
A0A0P0X8V2
Os07g0624100 protein.
  
     0.498
A0A0P0WD76
Os04g0542100 protein.
  
     0.493
A0A0P0V9D9
Os01g0802400 protein.
  
     0.492
A0A0P0XEY8
Os07g0564533 protein.
  
     0.492
A0A0P0VRK4
Os02g0828533 protein.
  
     0.472
A0A0P0VJA6
Os02g0497000 protein.
  
     0.440
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.