STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7EIS5_ORYSJcDNA clone:J023075I12, full insert sequence. (419 aa)    
Predicted Functional Partners:
UGD3
UDP-glucose 6-dehydrogenase 3; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.
  
 0.963
OJ1656_A11.20
UDP-D-apiose/UDP-D-xylose synthase; Catalyzes the conversion of UDP-D-glucuronate to a mixture of UDP-D-apiose and UDP-D-xylose. D-Apiose (3-C-hydroxymethyl-d-erythrose) is the only plant cell wall monosaccharide with a branched carbon skeleton and found in rhamnogalacturonan II (RG-II), apiogalacturonan, and several apioglycosides (By similarity); Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
0.950
USP
UDP-sugar pyrophosphorylase; May function as the terminal enzyme of the myo-inositol oxidation (MIO) pathway. May also play a role in the salvage pathway for synthesis of nucleotide sugars (By similarity).
   
 
 0.947
UEL-3
Probable UDP-arabinose 4-epimerase 3.
   
0.947
UEL-2
Probable UDP-arabinose 4-epimerase 2.
   
0.947
UEL-1
Probable UDP-arabinose 4-epimerase 1.
   
0.947
UGD5
UDP-glucose 6-dehydrogenase 5; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.
  
 0.945
UGD4
UDP-glucose 6-dehydrogenase 4; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.
  
 0.945
CSLD4
Cellulose synthase-like protein D4; Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like D subfamily.
     
 0.942
UGD1
UDP-glucose 6-dehydrogenase 1; Involved in the biosynthesis of UDP-glucuronic acid (UDP- GlcA), providing nucleotide sugars for cell-wall polymers.
  
 0.912
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.