STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9FEC8_ORYSJOs04g0304600 protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (373 aa)    
Predicted Functional Partners:
A0A0P0WS15
Os06g0111600 protein.
  
 0.905
4CL2
Probable 4-coumarate--CoA ligase 2.
  
 0.867
4CLL9
4-coumarate--CoA ligase-like 9.
  
 0.860
CHI
Chalcone--flavonone isomerase; Catalyzes the intramolecular cyclization of bicyclic chalcones into tricyclic (S)-flavanones. Responsible for the isomerization of 4,2',4',6'-tetrahydroxychalcone (also termed chalcone) into naringenin (By similarity).
    
 0.857
CHS1
Chalcone synthase 1; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
  
 
0.837
A0A0P0XYJ2
Os11g0136500 protein.
   
 0.785
Q2QY38_ORYSJ
4'-phosphopantetheinyl transferase superfamily protein, expressed.
   
 0.785
Q6Z0U9_ORYSJ
cDNA clone:002-103-A03, full insert sequence.
   
 0.785
Q2QYK6_ORYSJ
Chalcone-flavonone isomerase family protein; Belongs to the chalcone isomerase family.
   
 
 0.784
Q2RBC7_ORYSJ
Chalcone-flavonone isomerase family protein; Belongs to the chalcone isomerase family.
   
 
 0.784
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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