STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9FXF7_ORYSJOs07g0508500 protein. (560 aa)    
Predicted Functional Partners:
Q0JC85_ORYSJ
cDNA clone:001-007-B02, full insert sequence.
   
 0.989
Q6ZC35_ORYSJ
Os08g0468400 protein.
   
 0.984
A0A0P0VV58
Os03g0236966 protein.
   
 0.964
Q5N9G9_ORYSJ
cDNA clone:J033028G02, full insert sequence.
    
 0.964
Q688U0_ORYSJ
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.962
B9GEE1_ORYSJ
Os12g0626300 protein.
    
 0.956
Q0DIX4_ORYSJ
Os05g0354300 protein.
   
 0.955
A0A0P0VQD8
Os02g0785900 protein.
    
 0.953
Q0JC96_ORYSJ
cDNA clone:J013169P12, full insert sequence; Belongs to the cullin family.
    
 0.953
Q65XE1_ORYSJ
cDNA clone:J033025D11, full insert sequence.
    
 0.944
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.