Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0N7KJL1 | A0A0N7KPD1 | A0A0N7KJL1 | A0A0N7KPD1 | Os04g0588200 protein. | Os08g0177600 protein. | 0.923 |
A0A0N7KJL1 | A0A0P0V657 | A0A0N7KJL1 | A0A0P0V657 | Os04g0588200 protein. | Os01g0660500 protein. | 0.995 |
A0A0N7KJL1 | B9GCW9_ORYSJ | A0A0N7KJL1 | B9GCW9 | Os04g0588200 protein. | Os12g0427600 protein; Belongs to the peptidase S8 family. | 0.542 |
A0A0N7KJL1 | NBS1 | A0A0N7KJL1 | Q7XD82 | Os04g0588200 protein. | Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. | 0.836 |
A0A0N7KJL1 | P0677H08.20 | A0A0N7KJL1 | O48653 | Os04g0588200 protein. | DNA polymerase alpha catalytic subunit; Polymerase alpha in a complex with DNA primase is a replicative polymerase; Belongs to the DNA polymerase type-B family. | 0.922 |
A0A0N7KJL1 | POLD1 | A0A0N7KJL1 | Q9LRE6 | Os04g0588200 protein. | DNA polymerase delta catalytic subunit; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | 0.935 |
A0A0N7KJL1 | Q6ZF30_ORYSJ | A0A0N7KJL1 | Q6ZF30 | Os04g0588200 protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.923 |
A0A0N7KJL1 | Q7XHW1_ORYSJ | A0A0N7KJL1 | Q7XHW1 | Os04g0588200 protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.995 |
A0A0N7KJL1 | TERT | A0A0N7KJL1 | Q8LKW0 | Os04g0588200 protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme (By similarity). | 0.469 |
A0A0N7KPD1 | A0A0N7KJL1 | A0A0N7KPD1 | A0A0N7KJL1 | Os08g0177600 protein. | Os04g0588200 protein. | 0.923 |
A0A0N7KPD1 | A0A0P0V657 | A0A0N7KPD1 | A0A0P0V657 | Os08g0177600 protein. | Os01g0660500 protein. | 0.957 |
A0A0N7KPD1 | B9GCW9_ORYSJ | A0A0N7KPD1 | B9GCW9 | Os08g0177600 protein. | Os12g0427600 protein; Belongs to the peptidase S8 family. | 0.485 |
A0A0N7KPD1 | NBS1 | A0A0N7KPD1 | Q7XD82 | Os08g0177600 protein. | Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. | 0.997 |
A0A0N7KPD1 | P0677H08.20 | A0A0N7KPD1 | O48653 | Os08g0177600 protein. | DNA polymerase alpha catalytic subunit; Polymerase alpha in a complex with DNA primase is a replicative polymerase; Belongs to the DNA polymerase type-B family. | 0.724 |
A0A0N7KPD1 | POLD1 | A0A0N7KPD1 | Q9LRE6 | Os08g0177600 protein. | DNA polymerase delta catalytic subunit; This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. | 0.811 |
A0A0N7KPD1 | Q7XHW1_ORYSJ | A0A0N7KPD1 | Q7XHW1 | Os08g0177600 protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.957 |
A0A0N7KPD1 | TERT | A0A0N7KPD1 | Q8LKW0 | Os08g0177600 protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme (By similarity). | 0.531 |
A0A0P0V657 | A0A0N7KJL1 | A0A0P0V657 | A0A0N7KJL1 | Os01g0660500 protein. | Os04g0588200 protein. | 0.995 |
A0A0P0V657 | A0A0N7KPD1 | A0A0P0V657 | A0A0N7KPD1 | Os01g0660500 protein. | Os08g0177600 protein. | 0.957 |
A0A0P0V657 | B9GCW9_ORYSJ | A0A0P0V657 | B9GCW9 | Os01g0660500 protein. | Os12g0427600 protein; Belongs to the peptidase S8 family. | 0.631 |
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