STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7IZY4_ORYSJOs03g0190000 protein. (248 aa)    
Predicted Functional Partners:
Q75KH8_ORYSJ
Os05g0390800 protein.
      
 0.493
WRKY30
cDNA clone:J013025I24, full insert sequence.
    
 
 0.486
C7J7H5_ORYSJ
Os10g0575401 protein.
      
 0.485
Q69XP8_ORYSJ
cDNA clone:002-121-F03, full insert sequence.
      
 0.485
Q94J34_ORYSJ
cDNA clone:J033023G10, full insert sequence.
      
 0.483
B9FIV0_ORYSJ
Os05g0211700 protein.
      
 0.479
B9FD64_ORYSJ
Os04g0665900 protein.
      
 0.478
A0A0P0V125
Os01g0278000 protein.
      
 0.451
Q7FB34_ORYSJ
cDNA clone:J013096O17, full insert sequence.
      
 0.451
Q5Z904_ORYSJ
Os06g0562700 protein.
      
 0.445
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.