STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7J2R7_ORYSJOs05g0125100 protein. (213 aa)    
Predicted Functional Partners:
A0A0N7KFT8
Os02g0661000 protein.
    
 0.740
Q69M23_ORYSJ
Os09g0314300 protein.
   
 
 0.693
A0A0P0VE35
Peroxisomal membrane protein PEX16.
     
 0.680
Q6ZKM0_ORYSJ
cDNA clone:J013001O15, full insert sequence.
     
 0.674
Q337M1_ORYSJ
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.645
A0A0P0X8Z2
Os07g0608900 protein.
     
 0.632
Q6YTX9_ORYSJ
Os07g0608800 protein.
     
 0.632
B7EBN1_ORYSJ
cDNA clone:001-044-E12, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.613
Q60ER7_ORYSJ
cDNA clone:001-019-F07, full insert sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.613
Q84QA9_ORYSJ
Peroxisomal membrane protein, putative, expressed; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.613
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.