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AMY1B protein (Oryza sativa Japonica) - STRING interaction network
"AMY1B" - Alpha-amylase isozyme C, putative, expressed in Oryza sativa Japonica
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMY1BAlpha-amylase isozyme C, putative, expressed; Important for breakdown of endosperm starch during germination (349 aa)    
Predicted Functional Partners:
OsJ_29437
Trehalose-6-phosphate synthase, putative, expressed (886 aa)
   
  0.950
4346981
Trehalose synthase, putative, expressed (885 aa)
   
  0.950
4346917
Trehalose-6-phosphate synthase, putative, expressed (863 aa)
   
  0.950
4345706
Trehalose-6-phosphate synthase, putative, expressed (824 aa)
   
  0.950
4345573
Trehalose-6-phosphate synthase, putative, expressed (862 aa)
   
  0.950
4339335
Trehalose-6-phosphate synthase, putative, expressed (859 aa)
   
  0.950
4339327
Trehalose synthase, putative, expressed (899 aa)
   
  0.950
4332112
Trehalose-6-phosphate synthase, putative, expressed (860 aa)
   
  0.950
4330971
Trehalose-6-phosphate synthase, putative, expressed (886 aa)
   
  0.950
4324621
Trehalose synthase, putative, expressed (913 aa)
   
  0.950
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa (javanica cultivar-group), Oryza sativa Aromatic Japonica Group, Oryza sativa Japonica Group, Oryza sativa Temperate Japonica Group, Oryza sativa Tropical Japonica Group, Oryza sativa aromatic cultivar-group, Oryza sativa japonica, Oryza sativa subsp. japonica, Oryza sativa temperate japonica cultivar-group, Oryza sativa tropical japonica cultivar-group, Oryza sativa var. javanica, Oryza sativa var. javanica Koern.
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