STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0D6D4_ORYSJOs07g0490500 protein. (312 aa)    
Predicted Functional Partners:
ALN
Probable allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoate by hydrolytic cleavage of the five-member hydantoin ring. Catalyzes the first step of the ureide allantoin degradation followed by the sequential activity of AAH, UGLYAH and UAH which allows a complete purine breakdown without the intermediate generation of urea (By similarity); Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
  
  
 0.769
Q94J90_ORYSJ
cDNA clone:J023114O11, full insert sequence.
  
  
 0.769
UMPS2
Orotidine 5'-phosphate decarboxylase; In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.705
UMPS1
Orotidine 5'-phosphate decarboxylase; In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.705
Q7XXQ9_ORYSJ
cDNA clone:J033133F17, full insert sequence.
  
 
 0.679
Q6Z744_ORYSJ
Putative dihydroorotate dehydrogenase.
  
  
 0.610
PYRD
Dihydroorotate dehydrogenase (quinone), mitochondrial; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.
  
  
 0.610
CARB
Carbamoyl-phosphate synthase large chain, chloroplastic; Involved in arginine biosynthesis.
  
  
 0.598
CARA
Carbamoyl-phosphate synthase small chain, chloroplastic; Involved in arginine biosynthesis; Belongs to the CarA family.
  
  
 0.598
PYRB
Aspartate carbamoyltransferase, chloroplastic.
  
  
 0.598
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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