STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0DF64_ORYSJOs06g0112700 protein. (367 aa)    
Predicted Functional Partners:
A0A0P0UZW0
Os01g0193900 protein.
    
 0.638
A0A0P0X4C9
Os07g0222501 protein.
  
     0.514
A0A0P0UZP4
Os01g0210200 protein.
  
     0.506
Q6EQL9_ORYSJ
Transposon protein, putative, Pong sub-class, expressed.
   
  
 0.477
Q0E0J3_ORYSJ
Os02g0546600 protein.
   
  
 0.467
A0A0P0WQ03
Os05g0528500 protein.
      
 0.455
Q6ZAG1_ORYSJ
Os08g0454000 protein.
      
 0.455
Q6H4V0_ORYSJ
Os02g0168200 protein.
      
 0.448
A0A0P0VJT4
Os02g0521100 protein.
   
  
 0.426
A0A0P0VBW1
Os01g0912600 protein.
   
 
  0.406
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.