STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0DFQ4_ORYSJOs05g0577100 protein. (297 aa)    
Predicted Functional Partners:
ADA2
Transcriptional adapter ADA2; Required for the function of some acidic activation domains, which activate transcription from a distant site. The exact mechanism of action is not yet known. ADA2 and GCN5 function to acetylate nucleosomes, opening up the promoter region (By similarity).
    
 0.909
Q2R2Z2_ORYSJ
Histone-like transcription factor and archaeal histone family protein, expressed.
   
 
 0.868
OsDrAp2
cDNA clone:J013150F08, full insert sequence.
   
 
 0.868
A0A0P0XQL1
Os09g0568200 protein.
   
 
 0.867
Q2QTK4_ORYSJ
cDNA clone:J033063H10, full insert sequence.
    
 0.867
OJ1320_D10.4
TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity).
    
 0.867
Q0E3P7_ORYSJ
Os02g0161300 protein.
    
 
 0.842
A2ZVA8_ORYSJ
cDNA, clone: J065077N17, full insert sequence.
    
 0.841
C7IYZ1_ORYSJ
Os02g0694201 protein.
    
 0.841
A0A0P0XLW8
Os09g0425300 protein.
    
 
 0.794
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.