STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0DNS7_ORYSJOs03g0736900 protein. (159 aa)    
Predicted Functional Partners:
Q5SN79_ORYSJ
cDNA clone:J013158F22, full insert sequence.
   
  
 0.506
Q75LM0_ORYSJ
Oligopeptide transporter 3, putative, expressed.
   
  
 0.453
IRO3
Protein IRON-RELATED TRANSCRIPTION FACTOR 3; Transcription factor that acts as negative regulator of the iron deficiency response. Suppresses the induction of iron deficiency responsive genes, such as NAS1, NAS2, IRO2, IRT1, YSL15, and NRAMP1 ; Belongs to the bHLH protein family.
   
  
 0.422
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.