STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0DNW7_ORYSJOs03g0729700 protein. (330 aa)    
Predicted Functional Partners:
Q0JD33_ORYSJ
Os04g0434300 protein.
  
  
 0.625
OsJ_34478
CDK5RAP1-like protein; Potential regulator of CDK5 activity; Belongs to the methylthiotransferase family. MiaB subfamily.
  
  
 0.625
Q6YXY1_ORYSJ
Os02g0137600 protein.
  
  
 0.594
A0A0P0W0Q3
Os03g0611000 protein.
  
  
 0.588
A0A0P0XLS3
Os09g0347900 protein.
  
  
 0.588
OJ1293_E04.25
Nicotinamide/nicotinic acid mononucleotide adenylyltransferase; Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate. Belongs to the eukaryotic NMN adenylyltransferase family.
  
  
 0.588
A0A0P0Y1Y5
Adenosylhomocysteinase.
     
 0.581
Q338C6_ORYSJ
cDNA clone:J013114M12, full insert sequence.
     
 0.581
A0A0P0XHQ7
Os08g0506500 protein.
     
 0.580
Q5JN17_ORYSJ
cDNA clone:J023122I17, full insert sequence.
     
 0.568
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.