STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0DPW0_ORYSJOs03g0657400 protein. (142 aa)    
Predicted Functional Partners:
A0A0P0WNQ6
Os05g0478800 protein.
  
     0.534
Q654W7_ORYSJ
Os06g0504900 protein.
  
     0.532
Q6ZA22_ORYSJ
cDNA clone:J013102P22, full insert sequence.
  
     0.532
Q0DFT7_ORYSJ
cDNA clone:002-142-F03, full insert sequence.
  
     0.529
A0A0P0V4K4
Os01g0586800 protein.
  
     0.528
Q6ERI5_ORYSJ
Os09g0334500 protein.
  
     0.528
Q5VMX9_ORYSJ
Os06g0158100 protein.
  
     0.519
A0A0N7KTD0
Os11g0685700 protein.
  
     0.516
Q7XHX5_ORYSJ
cDNA clone:002-173-B01, full insert sequence.
  
     0.512
Q0JBA9_ORYSJ
cDNA clone:J033063J05, full insert sequence.
  
   
0.497
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.