STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0IMQ3_ORYSJOs12g0554800 protein. (424 aa)    
Predicted Functional Partners:
Q0DX02_ORYSJ
Pectinesterase.
    
 0.926
B7EWK0_ORYSJ
cDNA clone:001-038-F07, full insert sequence.
    
  0.810
OsJ_33906
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the C-terminal section; belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.
    
  0.810
A0A0P0WQ70
Os05g0553700 protein; Belongs to the syntaxin family.
    
  0.742
Q0J2C7_ORYSJ
Os09g0359700 protein.
    
  0.742
Q6ZBH2_ORYSJ
cDNA clone:001-124-E11, full insert sequence.
    
  0.742
A0A0N7KE92
Os01g0903100 protein.
    
 0.639
A0A0N7KSE5
Os11g0139066 protein.
    
 0.639
A0A0P0UYF3
Os01g0153800 protein.
    
 0.639
A0A0P0VVI4
Os03g0252100 protein.
    
 0.639
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.