STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0ITV5_ORYSJOs11g0213700 protein. (915 aa)    
Predicted Functional Partners:
Q10EP9_ORYSJ
Serine/threonine-protein kinase 12, putative, expressed; Belongs to the protein kinase superfamily.
   
  0.515
Q5SNH4_ORYSJ
cDNA clone:006-304-B11, full insert sequence; Belongs to the protein kinase superfamily.
   
  0.515
A0A0P0V6V4
Os01g0694100 protein.
  
 
   0.510
B9G9U6_ORYSJ
Os11g0197000 protein.
  
 
   0.504
A0A0P0VF15
Os02g0155600 protein.
  
 
   0.493
Q75J37_ORYSJ
Leucine Rich Repeat family protein, expressed.
  
     0.489
A0A0P0VF33
Os02g0161450 protein.
  
 
   0.488
A0A0P0XCT0
Os08g0203100 protein.
  
   0.485
Q6ZEZ7_ORYSJ
Os07g0176500 protein.
  
     0.481
A0A0P0Y164
Os11g0261400 protein.
  
 
   0.480
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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