STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DRB7Double-stranded RNA-binding protein 7; Binds double-stranded RNA. (473 aa)    
Predicted Functional Partners:
P0610D01.10
Elongation factor 1-gamma 3; Probably plays a role in anchoring the complex to other cellular components.
   
 0.995
B1131G07.11
Elongation factor 1-gamma 2; Probably plays a role in anchoring the complex to other cellular components.
   
 0.995
B1131G07.12
Elongation factor 1-gamma 1; Probably plays a role in anchoring the complex to other cellular components.
   
 0.995
P0453E03.116
Elongation factor 1-beta; EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.958
P0616D06.117
Elongation factor 1-delta 1; EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.958
EF1D2_ORYSJ
Elongation factor 1-delta 2; EF-1-beta and EF-1-beta' stimulate the exchange of GDP bound to EF-1-alpha to GTP; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.958
Q75LR5_ORYSJ
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.932
Q8LH97_ORYSJ
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.932
Q69UI8_ORYSJ
cDNA clone:001-011-G09, full insert sequence; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.925
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.924
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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