Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALDH5F1 | NIA1 | B9F3B6 | P16081 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.614 |
ALDH5F1 | Q0E3L4_ORYSJ | B9F3B6 | Q0E3L4 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Os02g0168100 protein. | 0.657 |
ALDH5F1 | Q0J0N7_ORYSJ | B9F3B6 | Q0J0N7 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | cDNA clone:002-141-C04, full insert sequence. | 0.631 |
ALDH5F1 | Q0JDV3_ORYSJ | B9F3B6 | Q0JDV3 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Os04g0372700 protein. | 0.650 |
ALDH5F1 | Q5JMM6_ORYSJ | B9F3B6 | Q5JMM6 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Os01g0753100 protein. | 0.631 |
ALDH5F1 | Q6ZC33_ORYSJ | B9F3B6 | Q6ZC33 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.614 |
ALDH5F1 | Q6ZHH7_ORYSJ | B9F3B6 | Q6ZHH7 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.614 |
ALDH5F1 | Q8H631_ORYSJ | B9F3B6 | Q8H631 | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.709 |
B9FLB9_ORYSJ | NIA1 | B9FLB9 | P16081 | Os05g0536400 protein. | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.614 |
B9FLB9_ORYSJ | Q0E3L4_ORYSJ | B9FLB9 | Q0E3L4 | Os05g0536400 protein. | Os02g0168100 protein. | 0.657 |
B9FLB9_ORYSJ | Q0J0N7_ORYSJ | B9FLB9 | Q0J0N7 | Os05g0536400 protein. | cDNA clone:002-141-C04, full insert sequence. | 0.631 |
B9FLB9_ORYSJ | Q0JDV3_ORYSJ | B9FLB9 | Q0JDV3 | Os05g0536400 protein. | Os04g0372700 protein. | 0.631 |
B9FLB9_ORYSJ | Q5JMM6_ORYSJ | B9FLB9 | Q5JMM6 | Os05g0536400 protein. | Os01g0753100 protein. | 0.631 |
B9FLB9_ORYSJ | Q6ZC33_ORYSJ | B9FLB9 | Q6ZC33 | Os05g0536400 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.614 |
B9FLB9_ORYSJ | Q6ZHH7_ORYSJ | B9FLB9 | Q6ZHH7 | Os05g0536400 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.614 |
B9FLB9_ORYSJ | Q8H631_ORYSJ | B9FLB9 | Q8H631 | Os05g0536400 protein. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.709 |
NIA1 | ALDH5F1 | P16081 | B9F3B6 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Succinate-semialdehyde dehydrogenase, mitochondrial; Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species (By similarity). | 0.614 |
NIA1 | B9FLB9_ORYSJ | P16081 | B9FLB9 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Os05g0536400 protein. | 0.614 |
NIA1 | Q0J0N7_ORYSJ | P16081 | Q0J0N7 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | cDNA clone:002-141-C04, full insert sequence. | 0.840 |
NIA1 | Q0JDV3_ORYSJ | P16081 | Q0JDV3 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Os04g0372700 protein. | 0.840 |
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