STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0J0S7_ORYSJOs09g0500300 protein. (1001 aa)    
Predicted Functional Partners:
A0A0N7KPK4
Os08g0273966 protein.
    
 0.754
A0A0P0V079
Os01g0234850 protein.
    
 0.754
A0A0P0XE35
Os08g0274775 protein.
    
 0.754
A3A073_ORYSJ
Os01g0879850 protein.
    
 0.754
Q5Z885_ORYSJ
cDNA clone:J013002D10, full insert sequence; Belongs to the PI3/PI4-kinase family.
    
 0.754
Q6I5E0_ORYSJ
Os05g0590100 protein.
    
 0.754
PI4KG4
Phosphatidylinositol 4-kinase gamma 4; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5- bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (By similarity). Involved in the control of flowering under long day conditions by promoting degradation of FTIP1. Recruits FTIP1 for degradation by the 26S proteasome in leaves, which affects RFT1 transport to the shoot apical meristem (SAM) ; Belongs to the PI3/PI4-kinase family. Type II PI4K subfamily.
    
 0.754
PRP19
Pre-mRNA-processing factor 19; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair.
    
   0.723
A0A0P0XY01
Os11g0104866 protein.
    
 0.648
A0A0P0Y653
Os12g0104766 protein.
    
 0.648
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.