STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0J1K1_ORYSJOs09g0434100 protein. (295 aa)    
Predicted Functional Partners:
A0A0P0WS80
Os06g0146300 protein.
   
 
 0.731
A0A0P0W249
Os03g0711200 protein; Belongs to the PI3/PI4-kinase family.
     
 0.693
A0A0P0XZW3
Os11g0209700 protein.
     
 0.691
Q5KQK1_ORYSJ
Os05g0180600 protein; Belongs to the PI3/PI4-kinase family.
     
 0.687
Q6UUD9_ORYSJ
Os08g0307400 protein; Belongs to the PI3/PI4-kinase family.
     
 0.687
Q75M66_ORYSJ
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.629
A0A0P0WWU4
Os06g0492000 protein.
     
 0.583
Q6Z717_ORYSJ
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.583
Q7XPQ0_ORYSJ
Os04g0625100 protein.
     
 0.583
A0A0P0V3N3
Os01g0540300 protein.
    
 0.582
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.