STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0JDJ8_ORYSJcDNA clone:J013002B23, full insert sequence. (816 aa)    
Predicted Functional Partners:
Q0DET1_ORYSJ
cDNA clone:J013001L08, full insert sequence.
  
 0.983
A0A0P0W290
Os03g0713700 protein.
   
 0.973
Q0JEA9_ORYSJ
Os04g0304000 protein.
  
 
 0.962
Q7F2A9_ORYSJ
cDNA clone:J023030P11, full insert sequence.
   
 
 0.903
Q75M66_ORYSJ
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.749
Q6ETY0_ORYSJ
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.681
A0A0P0Y117
Os11g0262500 protein.
     
  0.540
A0A0P0W4D5
Os03g0801600 protein.
    
 
 0.539
Q7G607_ORYSJ
cDNA clone:J023011O11, full insert sequence.
    
 
 0.539
P5CS1
Delta-1-pyrroline-5-carboxylate synthase 1; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants. Involved in abiotic stress tolerance. In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
      
 0.518
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.