STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0JJQ7_ORYSJMalic enzyme. (592 aa)    
Predicted Functional Partners:
Q10LR5_ORYSJ
Fumarate hydratase 1, mitochondrial, putative, expressed.
  
 
 0.976
Q6YYW3_ORYSJ
cDNA clone:001-205-B06, full insert sequence.
  
 0.966
MS
Malate synthase; Belongs to the malate synthase family.
  
 
 0.965
Q0E4Q5_ORYSJ
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.959
Q9LWZ6_ORYSJ
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.959
PPDK1
Pyruvate, phosphate dikinase 1, chloroplastic; Formation of phosphoenolpyruvate. The cytoplasmic isoform supports the biosynthetic processes in the nascent endosperm and provides an efficient mechanism for glycolytic ATP synthesis in oxygen depleted tissues. May be involved in regulating the flux of carbon into starch and fatty acids of seeds and in the remobilization of nitrogen reserves in senescing leaves; Belongs to the PEP-utilizing enzyme family.
     
 0.949
PPDK2
Pyruvate, phosphate dikinase 2; Formation of phosphoenolpyruvate.
     
 0.949
Q337E9_ORYSJ
Malic enzyme.
  
  
 
0.943
Q7F190_ORYSJ
Malic enzyme.
  
  
 
0.943
Q6EUF8_ORYSJ
Citrate synthase.
  
 0.940
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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