STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0JK65_ORYSJOs01g0694000 protein; Belongs to the protein kinase superfamily. (487 aa)    
Predicted Functional Partners:
A0A0P0VM15
Os02g0627700 protein.
    
  0.683
Q0J9M1_ORYSJ
Os04g0643600 protein.
    
  0.683
Q0DNE3_ORYSJ
Os03g0758300 protein.
    
  0.682
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.615
A0A0P0V919
Os01g0782800 protein.
    
  0.582
A0A0P0Y776
Os12g0163000 protein.
    
  0.582
A0A0P0Y7D7
Os12g0163100 protein.
    
  0.582
A3B9H5_ORYSJ
cDNA, clone: J065216G16, full insert sequence.
    
  0.582
Q60EI8_ORYSJ
Os05g0502000 protein.
    
  0.582
Q6ZHE3_ORYSJ
Os02g0773400 protein.
    
  0.582
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.