STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0JNH5_ORYSJOs01g0290700 protein. (148 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
    
 0.653
Q0D3X3_ORYSJ
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.636
Q0IRM9_ORYSJ
Os11g0615000 protein.
    
 0.636
Q658I3_ORYSJ
Os06g0128300 protein.
  
 
0.635
Q10LW5_ORYSJ
ATP-dependent transporter ycf16, putative, expressed.
    
 0.623
Q69LA5_ORYSJ
cDNA clone:J013048L15, full insert sequence.
  
 0.618
ACC2
Acetyl-CoA carboxylase 2; Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation.
   
 0.610
ACC1-2
Acetyl-CoA carboxylase 1; Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation.
   
 0.610
Q67U60_ORYSJ
cDNA clone:J023001J23, full insert sequence.
   
 
 0.609
Q6K4P5_ORYSJ
Diacylglycerol kinase; Belongs to the eukaryotic diacylglycerol kinase family.
    
 0.603
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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