Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYCA1-3 | OsJ_000980 | Q0INT0 | Q0JPA6 | Cyclin-A1-3. | Salt stress root protein RS1; Belongs to the DREPP family. | 0.400 |
CYCA1-3 | Q5NAY1_ORYSJ | Q0INT0 | Q5NAY1 | Cyclin-A1-3. | Os01g0233400 protein. | 0.542 |
OsJ_000980 | CYCA1-3 | Q0JPA6 | Q0INT0 | Salt stress root protein RS1; Belongs to the DREPP family. | Cyclin-A1-3. | 0.400 |
OsJ_000980 | Q10MF3_ORYSJ | Q0JPA6 | Q10MF3 | Salt stress root protein RS1; Belongs to the DREPP family. | cDNA clone:001-018-G06, full insert sequence. | 0.461 |
OsJ_000980 | Q5NAY1_ORYSJ | Q0JPA6 | Q5NAY1 | Salt stress root protein RS1; Belongs to the DREPP family. | Os01g0233400 protein. | 0.559 |
OsJ_000980 | prx39 | Q0JPA6 | Q5U1Q4 | Salt stress root protein RS1; Belongs to the DREPP family. | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | 0.446 |
Q10MF3_ORYSJ | OsJ_000980 | Q10MF3 | Q0JPA6 | cDNA clone:001-018-G06, full insert sequence. | Salt stress root protein RS1; Belongs to the DREPP family. | 0.461 |
Q5NAY1_ORYSJ | CYCA1-3 | Q5NAY1 | Q0INT0 | Os01g0233400 protein. | Cyclin-A1-3. | 0.542 |
Q5NAY1_ORYSJ | OsJ_000980 | Q5NAY1 | Q0JPA6 | Os01g0233400 protein. | Salt stress root protein RS1; Belongs to the DREPP family. | 0.559 |
prx39 | OsJ_000980 | Q5U1Q4 | Q0JPA6 | Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. | Salt stress root protein RS1; Belongs to the DREPP family. | 0.446 |