STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q109X3_ORYSJOs10g0206500 protein. (188 aa)    
Predicted Functional Partners:
Q10E16_ORYSJ
Protein kinase domain containing protein, expressed; Belongs to the protein kinase superfamily.
    
 0.822
A0A0P0V4K5
Os01g0586600 protein.
   
 0.783
A0A0P0VRK8
Os02g0818000 protein.
   
 0.783
A0A0P0W9F4
Os04g0380000 protein.
   
 0.783
A0A0P0WA33
Os04g0401300 protein.
   
 0.783
A0A0P0WGE7
Os04g0679600 protein.
   
 0.783
A0A0P0WLE8
Os05g0364650 protein.
   
 0.783
Q0IWM7_ORYSJ
Os10g0499400 protein.
   
 0.783
Q5JJJ9_ORYSJ
Os01g0920000 protein.
   
 0.783
Q5VNT2_ORYSJ
cDNA clone:002-153-F10, full insert sequence.
   
 0.783
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.