Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0N7KQA7 | A0A0P0W9C3 | A0A0N7KQA7 | A0A0P0W9C3 | Os08g0559700 protein. | Os04g0348300 protein. | 0.800 |
A0A0N7KQA7 | C3H16_ORYSJ | A0A0N7KQA7 | Q6YVX9 | Os08g0559700 protein. | Zinc finger CCCH domain-containing protein 16. | 0.791 |
A0A0N7KQA7 | PRP19 | A0A0N7KQA7 | Q9AV81 | Os08g0559700 protein. | Pre-mRNA-processing factor 19; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. | 0.685 |
A0A0N7KQA7 | Q0JKK3_ORYSJ | A0A0N7KQA7 | Q0JKK3 | Os08g0559700 protein. | Os01g0667800 protein. | 0.791 |
A0A0N7KQA7 | Q10B15_ORYSJ | A0A0N7KQA7 | Q10B15 | Os08g0559700 protein. | cDNA clone:002-149-C11, full insert sequence. | 0.891 |
A0A0N7KQA7 | Q6EUK2_ORYSJ | A0A0N7KQA7 | Q6EUK2 | Os08g0559700 protein. | cDNA clone:J023062O22, full insert sequence. | 0.949 |
A0A0N7KQA7 | U2AF35A | A0A0N7KQA7 | Q9ZQW8 | Os08g0559700 protein. | Splicing factor U2af small subunit A; Necessary for the splicing of pre-mRNA. | 0.791 |
A0A0N7KQA7 | U2AF35B | A0A0N7KQA7 | Q6AUG0 | Os08g0559700 protein. | Splicing factor U2af small subunit B; Necessary for the splicing of pre-mRNA; Belongs to the splicing factor SR family. | 0.791 |
A0A0P0W9C3 | A0A0N7KQA7 | A0A0P0W9C3 | A0A0N7KQA7 | Os04g0348300 protein. | Os08g0559700 protein. | 0.800 |
A0A0P0W9C3 | C3H16_ORYSJ | A0A0P0W9C3 | Q6YVX9 | Os04g0348300 protein. | Zinc finger CCCH domain-containing protein 16. | 0.704 |
A0A0P0W9C3 | PRP19 | A0A0P0W9C3 | Q9AV81 | Os04g0348300 protein. | Pre-mRNA-processing factor 19; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair. | 0.999 |
A0A0P0W9C3 | Q0JKK3_ORYSJ | A0A0P0W9C3 | Q0JKK3 | Os04g0348300 protein. | Os01g0667800 protein. | 0.704 |
A0A0P0W9C3 | Q10B15_ORYSJ | A0A0P0W9C3 | Q10B15 | Os04g0348300 protein. | cDNA clone:002-149-C11, full insert sequence. | 0.940 |
A0A0P0W9C3 | Q33BE1_ORYSJ | A0A0P0W9C3 | Q33BE1 | Os04g0348300 protein. | Transposon protein, putative, CACTA, En/Spm sub-class, expressed. | 0.800 |
A0A0P0W9C3 | Q69IN4_ORYSJ | A0A0P0W9C3 | Q69IN4 | Os04g0348300 protein. | cDNA clone:J013129L11, full insert sequence. | 0.800 |
A0A0P0W9C3 | Q6EUK2_ORYSJ | A0A0P0W9C3 | Q6EUK2 | Os04g0348300 protein. | cDNA clone:J023062O22, full insert sequence. | 0.977 |
A0A0P0W9C3 | U2AF35A | A0A0P0W9C3 | Q9ZQW8 | Os04g0348300 protein. | Splicing factor U2af small subunit A; Necessary for the splicing of pre-mRNA. | 0.704 |
A0A0P0W9C3 | U2AF35B | A0A0P0W9C3 | Q6AUG0 | Os04g0348300 protein. | Splicing factor U2af small subunit B; Necessary for the splicing of pre-mRNA; Belongs to the splicing factor SR family. | 0.704 |
C3H16_ORYSJ | A0A0N7KQA7 | Q6YVX9 | A0A0N7KQA7 | Zinc finger CCCH domain-containing protein 16. | Os08g0559700 protein. | 0.791 |
C3H16_ORYSJ | A0A0P0W9C3 | Q6YVX9 | A0A0P0W9C3 | Zinc finger CCCH domain-containing protein 16. | Os04g0348300 protein. | 0.704 |
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