STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMT4-1Putative ammonium transporter 4 member 1. (299 aa)    
Predicted Functional Partners:
GLB
Nitrogen regulatory protein P-II homolog; Participates in sensing carbon and organic nitrogen status and regulates some steps of primary carbon and nitrogen metabolism.
  
 0.988
GLN2
Glutamine synthetase, chloroplastic; The light-modulated chloroplast enzyme, encoded by a nuclear gene and expressed primarily in leaves, is responsible for the reassimilation of the ammonia generated by photorespiration. Belongs to the glutamine synthetase family.
  
  
 0.649
AMT1-1
Ammonium transporter 1 member 1; Ammonium transporter probably involved in ammonium uptake from the soil; Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
  
   
 0.615
AMT1-3
Ammonium transporter 1 member 3; Ammonium transporter probably involved in ammonium uptake from the soil; Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
  
   
 0.611
AMT1-2
Ammonium transporter 1 member 2; Ammonium transporter probably involved in ammonium uptake from the soil and ammonium uptake and retrieval in the vascular system. Belongs to the ammonia transporter channel (TC 1.A.11.2) family.
  
   
 0.601
GLN1-2
Glutamine synthetase cytosolic isozyme 1-2; High-affinity glutamine synthetase. May play a role in the primary assimilation of ammonium taken up by roots.
  
  
 0.578
GLN1-3
Glutamine synthetase cytosolic isozyme 1-3; Belongs to the glutamine synthetase family.
  
  
 0.578
GLN1-1
Glutamine synthetase cytosolic isozyme 1-1; High-affinity glutamine synthetase. May be a major component of the cytosolic glutamine synthetic pathway in leaf blades.
  
  
 0.549
ACC1
1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants.
     
 0.494
Q0IX96_ORYSJ
cDNA clone:J013075P13, full insert sequence; Belongs to the glutamine synthetase family.
  
  
 0.493
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (30%) [HD]