STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10FD6_ORYSJHelix-loop-helix DNA-binding domain containing protein, expressed. (385 aa)    
Predicted Functional Partners:
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
   
 
 0.895
OsJ_12779
Glucose-6-phosphate isomerase, cytosolic A; Belongs to the GPI family.
   
 
 0.792
P0624H09.14
Glucose-6-phosphate isomerase, cytosolic B; Belongs to the GPI family.
   
 
 0.792
Q33AE4_ORYSJ
Phosphoglucomutase, chloroplast, putative, expressed.
   
 
 0.775
Q69V57_ORYSJ
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.774
Q94JJ0_ORYSJ
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
     
 0.774
Q9AUQ4_ORYSJ
Phosphoglucomutase, cytoplasmic 2, putative, expressed; Belongs to the phosphohexose mutase family.
   
 
 0.774
B9FSC3_ORYSJ
Os06g0232200 protein; Belongs to the carbohydrate kinase PfkB family.
     
 0.773
Q6YXI1_ORYSJ
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.762
Q6ZB94_ORYSJ
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.762
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.