STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10L50_ORYSJCytokinin synthase, putative. (328 aa)    
Predicted Functional Partners:
A0A0P0V0B7
Os01g0248701 protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
Q6ET88_ORYSJ
cDNA clone:001-204-C07, full insert sequence; Belongs to the FPP/GGPP synthase family.
  
 
 0.833
Q6AUB0_ORYSJ
cDNA clone:001-008-C05, full insert sequence.
    
 0.727
Q8GVZ0_ORYSJ
cDNA clone:001-039-H09, full insert sequence.
    
 0.727
Q0DNV6_ORYSJ
Os03g0732000 protein.
     
 0.724
ISPH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Is essential for chloroplast development.
     
 0.724
A0A0P0WJL3
Os05g0235701 protein.
  
 
 0.721
A0A0P0XDI7
Os08g0193100 protein.
  
 
 0.721
SPS1-2
Solanesyl-diphosphate synthase 1, mitochondrial; Involved in the supply of solanesyl diphosphate for ubiquinone-9 (UQ-9) biosynthesis in mitochondria. Farnesyl diphosphate is the preferred substrate.
  
 
 0.721
Q7XI92_ORYSJ
cDNA clone:J023007O22, full insert sequence; Belongs to the FPP/GGPP synthase family.
  
 
 0.721
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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