STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10MK3_ORYSJPeptide chain release factor 2 family protein, expressed. (468 aa)    
Predicted Functional Partners:
Q2QM99_ORYSJ
Modification methylase, HemK family protein, expressed.
  
 
 0.958
Q852B9_ORYSJ
cDNA clone:001-032-F02, full insert sequence.
  
 
 0.958
RPL27
50S ribosomal protein L27, chloroplastic; Belongs to the bacterial ribosomal protein bL27 family.
  
 
 0.899
Q8RVB1_ORYSJ
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.896
Q9LWD2_ORYSJ
cDNA clone:001-104-E12, full insert sequence.
  
 
 0.879
TK
Thymidine kinase.
  
  
 0.869
Q0DHP9_ORYSJ
Os05g0452600 protein.
   
 
 0.865
Q10P29_ORYSJ
Immature colon carcinoma transcript 1 protein, putative, expressed.
   
 
 0.856
Q7XAM9_ORYSJ
cDNA clone:J023022A05, full insert sequence; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.848
rps9
30S ribosomal protein S9, chloroplast, putative, expressed; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.848
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.