STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10N60_ORYSJcDNA clone:J023010L23, full insert sequence. (839 aa)    
Predicted Functional Partners:
Q5JMX7_ORYSJ
Os01g0752500 protein.
     
 0.736
GF14H
Putative 14-3-3-like protein GF14-H; Is associated with a DNA binding complex that binds to the G box, a well-characterized cis-acting DNA regulatory element found in plant genes.
   
 0.686
A0A0P0V1T6
Os01g0314700 protein.
    
  0.678
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.648
A0A0N7KG12
Os02g0729400 protein.
    
 0.578
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
 0.564
A0A0P0VAM2
Os01g0857300 protein.
    
  0.509
Q8RUE8_ORYSJ
Putative 3-phosphoinositide-dependent protein kinase-1.
    
 
0.504
A0A0P0XU08
Os10g0372500 protein.
    
  0.501
Q7XDE1_ORYSJ
cDNA clone:002-174-D09, full insert sequence.
    
  0.501
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.