Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A0P0WJ34 | Q10QF4_ORYSJ | A0A0P0WJ34 | Q10QF4 | Os05g0207900 protein. | cDNA clone:001-007-H08, full insert sequence. | 0.446 |
| A0A0P0XRM8 | OsJ_06853 | A0A0P0XRM8 | Q6K6K7 | Os10g0141400 protein. | Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates UFM1; Belongs to the ubiquitin-activating E1 family. UBA5 subfamily. | 0.519 |
| A0A0P0XRM8 | OsRPN12 | A0A0P0XRM8 | Q8W423 | Os10g0141400 protein. | 26S proteasome regulatory particle non-ATPase subunit12. | 0.999 |
| A0A0P0XRM8 | PAE1 | A0A0P0XRM8 | Q9LSU1 | Os10g0141400 protein. | Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. | 0.998 |
| A0A0P0XRM8 | Q10QF4_ORYSJ | A0A0P0XRM8 | Q10QF4 | Os10g0141400 protein. | cDNA clone:001-007-H08, full insert sequence. | 0.406 |
| A0A0P0XRM8 | Q851Y6_ORYSJ | A0A0P0XRM8 | Q851Y6 | Os10g0141400 protein. | cDNA clone:J023081N11, full insert sequence. | 0.999 |
| A0A0P0XRM8 | RPN10 | A0A0P0XRM8 | O82143 | Os10g0141400 protein. | 26S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Belongs to the proteasome subunit S5A family. | 0.556 |
| BI1 | Q10QF4_ORYSJ | Q9MBD8 | Q10QF4 | Bax inhibitor 1; Suppressor of apoptosis. | cDNA clone:001-007-H08, full insert sequence. | 0.485 |
| OsJ_06853 | A0A0P0XRM8 | Q6K6K7 | A0A0P0XRM8 | Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates UFM1; Belongs to the ubiquitin-activating E1 family. UBA5 subfamily. | Os10g0141400 protein. | 0.519 |
| OsJ_06853 | Q10QF4_ORYSJ | Q6K6K7 | Q10QF4 | Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates UFM1; Belongs to the ubiquitin-activating E1 family. UBA5 subfamily. | cDNA clone:001-007-H08, full insert sequence. | 0.408 |
| OsJ_06853 | RPN10 | Q6K6K7 | O82143 | Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates UFM1; Belongs to the ubiquitin-activating E1 family. UBA5 subfamily. | 26S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Belongs to the proteasome subunit S5A family. | 0.519 |
| OsRPN12 | A0A0P0XRM8 | Q8W423 | A0A0P0XRM8 | 26S proteasome regulatory particle non-ATPase subunit12. | Os10g0141400 protein. | 0.999 |
| OsRPN12 | PAE1 | Q8W423 | Q9LSU1 | 26S proteasome regulatory particle non-ATPase subunit12. | Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. | 0.998 |
| OsRPN12 | Q10QF4_ORYSJ | Q8W423 | Q10QF4 | 26S proteasome regulatory particle non-ATPase subunit12. | cDNA clone:001-007-H08, full insert sequence. | 0.485 |
| OsRPN12 | Q851Y6_ORYSJ | Q8W423 | Q851Y6 | 26S proteasome regulatory particle non-ATPase subunit12. | cDNA clone:J023081N11, full insert sequence. | 0.999 |
| OsRPN12 | RPN10 | Q8W423 | O82143 | 26S proteasome regulatory particle non-ATPase subunit12. | 26S proteasome non-ATPase regulatory subunit 4 homolog; Plays a role in maintaining the structural integrity of the 19S regulatory particle (RP), subcomplex of the 26S proteasome. Plays a major role in both the direct and indirect recognition of ubiquitinated substrates of ubiquitin/26S proteasome-mediated proteolysis (UPP). Binds and presumably selects ubiquitin-conjugates for destruction. Belongs to the proteasome subunit S5A family. | 0.999 |
| PAE1 | A0A0P0XRM8 | Q9LSU1 | A0A0P0XRM8 | Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. | Os10g0141400 protein. | 0.998 |
| PAE1 | OsRPN12 | Q9LSU1 | Q8W423 | Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. | 26S proteasome regulatory particle non-ATPase subunit12. | 0.998 |
| PAE1 | Q10QF4_ORYSJ | Q9LSU1 | Q10QF4 | Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. | cDNA clone:001-007-H08, full insert sequence. | 0.485 |
| PAE1 | Q851Y6_ORYSJ | Q9LSU1 | Q851Y6 | Proteasome subunit alpha type-5; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity; Belongs to the peptidase T1A family. | cDNA clone:J023081N11, full insert sequence. | 0.999 |
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