STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10R45_ORYSJAlanine-glyoxylate aminotransferase 2, mitochondrial, putative, expressed; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (486 aa)    
Predicted Functional Partners:
Q6ZFI6_ORYSJ
cDNA clone:J013000A23, full insert sequence.
  
 0.981
Q69UU3_ORYSJ
cDNA clone:J013118J02, full insert sequence.
   
 0.967
Q7XPR5_ORYSJ
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.957
Q8GRH8_ORYSJ
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.957
Q6Z4E4_ORYSJ
cDNA clone:J023108H13, full insert sequence.
   
 
 0.955
A0A0P0XUE4
Os10g0390500 protein.
   
 0.953
Q0D4M5_ORYSJ
Os07g0617800 protein.
   
 0.953
Q0IXY9_ORYSJ
Os10g0390600 protein.
   
 0.953
Q69PH8_ORYSJ
cDNA clone:002-125-F01, full insert sequence.
   
 0.953
A0A0P0VYR6
Os03g0376100 protein.
   
 
 0.949
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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