STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10S34_ORYSJAconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (986 aa)    
Predicted Functional Partners:
Q6EUF8_ORYSJ
Citrate synthase.
  
 0.997
Q7F8R1_ORYSJ
Citrate synthase; Belongs to the citrate synthase family.
  
 0.997
A0A0P0Y2X7
Citrate synthase; Belongs to the citrate synthase family.
  
 0.994
Q0JBV4_ORYSJ
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.994
Q65XK3_ORYSJ
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.993
Q7F280_ORYSJ
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.993
Q9XHX4_ORYSJ
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.993
A0A0P0Y4G2
Os11g0623601 protein.
  
 0.991
ICL
Isocitrate lyase; Involved in storage lipid mobilization during the growth of higher plant seedling.
  
 0.979
OsIDHa
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.976
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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