STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10SE5_ORYSJD111/G-patch domain-containing protein, putative, expressed. (384 aa)    
Predicted Functional Partners:
Q9LGT2_ORYSJ
cDNA clone:J023063M08, full insert sequence.
   
   0.990
Q6EQN5_ORYSJ
Os09g0352400 protein.
   
   0.977
A0A0P0XCN7
Os08g0199900 protein.
   
 
 0.962
Q10MC6_ORYSJ
Pre-mRNA splicing factor ATP-dependent RNA helicase, putative, expressed.
   
 
 0.962
A0A0P0WHV8
Os05g0147200 protein.
   
   0.940
A0A0P0WI69
Os05g0147150 protein.
   
   0.940
A0A0N7KGC5
Os02g0821800 protein.
   
   0.935
B7FA85_ORYSJ
cDNA, clone: J100055L06, full insert sequence.
   
   0.935
Q10PA5_ORYSJ
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.935
Q7G608_ORYSJ
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.935
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.