STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10SL7_ORYSJDihydrodipicolinate reductase, C-terminus family protein, expressed. (335 aa)    
Predicted Functional Partners:
Q93Y73_ORYSJ
Aspartate-semialdehyde dehydrogenase family protein, expressed.
  
 
 0.957
A0A0P0W6G1
Os04g0136500 protein.
  
 
 0.876
A0A0P0XPU2
Os09g0543400 protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.876
Q6K2K1_ORYSJ
Os02g0482400 protein.
  
 
 0.876
LYSA
Probable diaminopimelate decarboxylase, chloroplastic; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. LysA subfamily.
  
 
 0.876
TK
Thymidine kinase.
    
  0.852
A0A0P0XJQ1
Os08g0535050 protein.
  
    0.843
A0A0P0Y7I6
Os12g0171200 protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.843
Q10S77_ORYSJ
PolyA polymerase family protein, expressed; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.843
Q7XV96_ORYSJ
cDNA clone:J013001K04, full insert sequence; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.843
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.