STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2QLM1_ORYSJUbiquitin-conjugating enzyme family protein, expressed. (161 aa)    
Predicted Functional Partners:
A0A0P0WHC1
Os05g0122400 protein.
    
 0.936
Q0DHI3_ORYSJ
Os05g0463900 protein.
    
 0.936
Q0E4T3_ORYSJ
Os02g0101700 protein.
    
 0.935
A0A0P0WLY1
Os05g0392000 protein.
    
 0.871
A0A0P0WM13
Os05g0392050 protein.
    
 0.871
Q109M1_ORYSJ
Ubiquitin-conjugating enzyme E2-23 kDa, putative, expressed; Belongs to the ubiquitin-conjugating enzyme family.
   
0.854
Q65XJ0_ORYSJ
Os05g0104900 protein.
    
 0.840
Q6YXU5_ORYSJ
cDNA clone:002-107-D07, full insert sequence.
    
 0.840
A0A0N7KH34
Os03g0294900 protein; Belongs to the ubiquitin-activating E1 family.
   
 0.834
A0A0P0XAH7
Os07g0692900 protein; Belongs to the ubiquitin-activating E1 family.
   
 0.834
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.