STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2QNI2_ORYSJZinc knuckle family protein, putative, expressed. (1159 aa)    
Predicted Functional Partners:
Q5JNB3_ORYSJ
Os01g0977600 protein.
    
 0.984
Q0JBZ7_ORYSJ
Os04g0501000 protein; Belongs to the universal ribosomal protein uL23 family.
    
   0.912
Q94CM9_ORYSJ
Os01g0348700 protein; Belongs to the universal ribosomal protein uL23 family.
    
   0.912
Q69IM4_ORYSJ
cDNA clone:J033091L10, full insert sequence.
    
 0.899
Q2QNF3_ORYSJ
60S ribosomal protein L2, putative, expressed.
    
   0.898
Q0JAI2_ORYSJ
Os04g0598200 protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.831
Q6Z8E0_ORYSJ
cDNA clone:J033076B01, full insert sequence; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.831
A0A0P0VSE5
Os03g0122200 protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.827
Q9AV82_ORYSJ
Ribosomal protein L11 containing protein, expressed; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.827
A0A0N7KRK6
Os10g0214132 protein.
    
   0.821
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.