STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXPA26Expansin-A26; May cause loosening and extension of plant cell walls by disrupting non-covalent bonding between cellulose microfibrils and matrix glucans. No enzymatic activity has been found. May be required for rapid internodal elongation in deepwater rice during submergence (By similarity). (290 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
   
 0.816
A0A0P0XQE9
Os09g0512450 protein.
    
 0.579
Q6K9N9_ORYSJ
cDNA clone:J023012G01, full insert sequence.
    
 0.579
A0A0P0WLY1
Os05g0392000 protein.
   
  0.567
A0A0P0WM13
Os05g0392050 protein.
   
  0.567
A0A0P0V1T6
Os01g0314700 protein.
    
 0.542
Q2R7H8_ORYSJ
TPR Domain containing protein, expressed.
    
 0.532
Q5QLI4_ORYSJ
cDNA clone:002-175-D06, full insert sequence.
    
 0.527
Q5VND0_ORYSJ
cDNA clone:J023002O16, full insert sequence.
    
  0.519
A0A0N7KR07
Os09g0484300 protein.
    
 0.509
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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