Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Q0JH55_ORYSJ | Q2QPD2_ORYSJ | Q0JH55 | Q2QPD2 | Os01g0882500 protein. | cDNA clone:J023076N12, full insert sequence. | 0.402 |
Q0JKF5_ORYSJ | Q2QPD2_ORYSJ | Q0JKF5 | Q2QPD2 | cDNA clone:001-110-B01, full insert sequence. | cDNA clone:J023076N12, full insert sequence. | 0.450 |
Q0JKF5_ORYSJ | Q5Z9Z5_ORYSJ | Q0JKF5 | Q5Z9Z5 | cDNA clone:001-110-B01, full insert sequence. | Os06g0319800 protein. | 0.452 |
Q2QPD2_ORYSJ | Q0JH55_ORYSJ | Q2QPD2 | Q0JH55 | cDNA clone:J023076N12, full insert sequence. | Os01g0882500 protein. | 0.402 |
Q2QPD2_ORYSJ | Q0JKF5_ORYSJ | Q2QPD2 | Q0JKF5 | cDNA clone:J023076N12, full insert sequence. | cDNA clone:001-110-B01, full insert sequence. | 0.450 |
Q2QPD2_ORYSJ | Q5Z9Z5_ORYSJ | Q2QPD2 | Q5Z9Z5 | cDNA clone:J023076N12, full insert sequence. | Os06g0319800 protein. | 0.496 |
Q2QPD2_ORYSJ | Q7XMP9_ORYSJ | Q2QPD2 | Q7XMP9 | cDNA clone:J023076N12, full insert sequence. | cDNA clone:006-312-B03, full insert sequence. | 0.427 |
Q2QPD2_ORYSJ | RAF1 | Q2QPD2 | Q7XDY9 | cDNA clone:J023076N12, full insert sequence. | Rubisco accumulation factor 1, chloroplastic; Required for assembly or stability of RuBisCO. Acts at a postchaperonin step to fold and/or assemble the large subunit (LS) into RuBisCO (By similarity); Belongs to the RAF family. | 0.444 |
Q5Z9Z5_ORYSJ | Q0JKF5_ORYSJ | Q5Z9Z5 | Q0JKF5 | Os06g0319800 protein. | cDNA clone:001-110-B01, full insert sequence. | 0.452 |
Q5Z9Z5_ORYSJ | Q2QPD2_ORYSJ | Q5Z9Z5 | Q2QPD2 | Os06g0319800 protein. | cDNA clone:J023076N12, full insert sequence. | 0.496 |
Q5Z9Z5_ORYSJ | Q7XMP9_ORYSJ | Q5Z9Z5 | Q7XMP9 | Os06g0319800 protein. | cDNA clone:006-312-B03, full insert sequence. | 0.431 |
Q5Z9Z5_ORYSJ | RAF1 | Q5Z9Z5 | Q7XDY9 | Os06g0319800 protein. | Rubisco accumulation factor 1, chloroplastic; Required for assembly or stability of RuBisCO. Acts at a postchaperonin step to fold and/or assemble the large subunit (LS) into RuBisCO (By similarity); Belongs to the RAF family. | 0.422 |
Q7XMP9_ORYSJ | Q2QPD2_ORYSJ | Q7XMP9 | Q2QPD2 | cDNA clone:006-312-B03, full insert sequence. | cDNA clone:J023076N12, full insert sequence. | 0.427 |
Q7XMP9_ORYSJ | Q5Z9Z5_ORYSJ | Q7XMP9 | Q5Z9Z5 | cDNA clone:006-312-B03, full insert sequence. | Os06g0319800 protein. | 0.431 |
Q7XMP9_ORYSJ | RAF1 | Q7XMP9 | Q7XDY9 | cDNA clone:006-312-B03, full insert sequence. | Rubisco accumulation factor 1, chloroplastic; Required for assembly or stability of RuBisCO. Acts at a postchaperonin step to fold and/or assemble the large subunit (LS) into RuBisCO (By similarity); Belongs to the RAF family. | 0.529 |
RAF1 | Q2QPD2_ORYSJ | Q7XDY9 | Q2QPD2 | Rubisco accumulation factor 1, chloroplastic; Required for assembly or stability of RuBisCO. Acts at a postchaperonin step to fold and/or assemble the large subunit (LS) into RuBisCO (By similarity); Belongs to the RAF family. | cDNA clone:J023076N12, full insert sequence. | 0.444 |
RAF1 | Q5Z9Z5_ORYSJ | Q7XDY9 | Q5Z9Z5 | Rubisco accumulation factor 1, chloroplastic; Required for assembly or stability of RuBisCO. Acts at a postchaperonin step to fold and/or assemble the large subunit (LS) into RuBisCO (By similarity); Belongs to the RAF family. | Os06g0319800 protein. | 0.422 |
RAF1 | Q7XMP9_ORYSJ | Q7XDY9 | Q7XMP9 | Rubisco accumulation factor 1, chloroplastic; Required for assembly or stability of RuBisCO. Acts at a postchaperonin step to fold and/or assemble the large subunit (LS) into RuBisCO (By similarity); Belongs to the RAF family. | cDNA clone:006-312-B03, full insert sequence. | 0.529 |