STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2QTN6_ORYSJOs12g0288600 protein. (561 aa)    
Predicted Functional Partners:
Q69IN1_ORYSJ
Os09g0514100 protein.
   
 0.587
Q7XPR2_ORYSJ
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 0.587
Q69LD2_ORYSJ
cDNA clone:001-202-D07, full insert sequence.
    
 0.580
Q2QWT8_ORYSJ
2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial, putative, expressed.
   
 0.572
A0A0P0W7G3
Os04g0217900 protein.
   
 0.545
A0A0P0W7H2
Os04g0218900 protein.
   
 0.545
A0A0P0WKH9
Os05g0305200 protein.
   
 0.545
Q0IPN1_ORYSJ
Os12g0181300 protein.
   
 0.545
Q6K8R6_ORYSJ
Os02g0605500 protein.
   
 0.545
PPS
cDNA clone:J013104O14, full insert sequence.
   
 0.545
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.