STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2QWM6_ORYSJThylakoid lumenal 29.8 kDa protein, putative, expressed. (273 aa)    
Predicted Functional Partners:
Q5ZDI7_ORYSJ
cDNA clone:006-202-F07, full insert sequence.
     
 0.594
Q8LNF2_ORYSJ
Thylakoid lumenal 17.4 kDa protein, chloroplast, putative, expressed.
   
  
 0.475
A0A0P0WS80
Os06g0146300 protein.
   
  
 0.474
Q6Z7Q1_ORYSJ
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 
  0.452
U603_ORYSJ
UPF0603 protein Os05g0401100, chloroplastic.
   
  
 0.451
PSB28
Photosystem II reaction center PSB28 protein, chloroplastic; Belongs to the Psb28 family.
   
 
  0.449
A0A0P0X4M5
Os07g0275100 protein.
     
 0.448
A0A0P0X511
Os07g0275801 protein.
     
 0.448
A0A0P0X5G9
Os07g0275901 protein.
     
 0.448
Q2QNI4_ORYSJ
Thylakoid lumenal 21.5 kDa protein, chloroplast, putative, expressed.
     
 0.448
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.