Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0V1T6 | A0A0P0XQE9 | A0A0P0V1T6 | A0A0P0XQE9 | Os01g0314700 protein. | Os09g0512450 protein. | 0.585 |
A0A0P0V1T6 | C7J1U6_ORYSJ | A0A0P0V1T6 | C7J1U6 | Os01g0314700 protein. | Os04g0589400 protein. | 0.973 |
A0A0P0V1T6 | Q337Y0_ORYSJ | A0A0P0V1T6 | Q337Y0 | Os01g0314700 protein. | EDR1, putative, expressed. | 0.682 |
A0A0P0V1T6 | Q6K9N9_ORYSJ | A0A0P0V1T6 | Q6K9N9 | Os01g0314700 protein. | cDNA clone:J023012G01, full insert sequence. | 0.585 |
A0A0P0XFY6 | Q337Y0_ORYSJ | A0A0P0XFY6 | Q337Y0 | Os08g0416400 protein. | EDR1, putative, expressed. | 0.631 |
A0A0P0XQE9 | A0A0P0V1T6 | A0A0P0XQE9 | A0A0P0V1T6 | Os09g0512450 protein. | Os01g0314700 protein. | 0.585 |
A0A0P0XQE9 | Q337Y0_ORYSJ | A0A0P0XQE9 | Q337Y0 | Os09g0512450 protein. | EDR1, putative, expressed. | 0.651 |
A0A0P0XQE9 | Q65XJ0_ORYSJ | A0A0P0XQE9 | Q65XJ0 | Os09g0512450 protein. | Os05g0104900 protein. | 0.603 |
A0A0P0XQE9 | Q6YXU5_ORYSJ | A0A0P0XQE9 | Q6YXU5 | Os09g0512450 protein. | cDNA clone:002-107-D07, full insert sequence. | 0.603 |
C7J1U6_ORYSJ | A0A0P0V1T6 | C7J1U6 | A0A0P0V1T6 | Os04g0589400 protein. | Os01g0314700 protein. | 0.973 |
C7J1U6_ORYSJ | Q337Y0_ORYSJ | C7J1U6 | Q337Y0 | Os04g0589400 protein. | EDR1, putative, expressed. | 0.791 |
C7J1U6_ORYSJ | Q8RUE8_ORYSJ | C7J1U6 | Q8RUE8 | Os04g0589400 protein. | Putative 3-phosphoinositide-dependent protein kinase-1. | 0.716 |
ERS1 | Q337Y0_ORYSJ | Q53RH0 | Q337Y0 | Probable ethylene response sensor 1; Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling. | EDR1, putative, expressed. | 0.723 |
ERS2 | Q337Y0_ORYSJ | Q0DKM0 | Q337Y0 | Probable ethylene response sensor 2; Ethylene receptor related to bacterial two-component regulators. Acts as negative regulator of ethylene signaling. May play a role in the regulation of flowering by upregulating GI (GIGANTEA) and RCN1 and regulate starch accumulation by down-regulating the alpha- amylase AMY3D. | EDR1, putative, expressed. | 0.723 |
Q337Y0_ORYSJ | A0A0P0V1T6 | Q337Y0 | A0A0P0V1T6 | EDR1, putative, expressed. | Os01g0314700 protein. | 0.682 |
Q337Y0_ORYSJ | A0A0P0XFY6 | Q337Y0 | A0A0P0XFY6 | EDR1, putative, expressed. | Os08g0416400 protein. | 0.631 |
Q337Y0_ORYSJ | A0A0P0XQE9 | Q337Y0 | A0A0P0XQE9 | EDR1, putative, expressed. | Os09g0512450 protein. | 0.651 |
Q337Y0_ORYSJ | C7J1U6_ORYSJ | Q337Y0 | C7J1U6 | EDR1, putative, expressed. | Os04g0589400 protein. | 0.791 |
Q337Y0_ORYSJ | ERS1 | Q337Y0 | Q53RH0 | EDR1, putative, expressed. | Probable ethylene response sensor 1; Ethylene receptor related to bacterial two-component regulators. Acts as a redundant negative regulator of ethylene signaling. | 0.723 |
Q337Y0_ORYSJ | ERS2 | Q337Y0 | Q0DKM0 | EDR1, putative, expressed. | Probable ethylene response sensor 2; Ethylene receptor related to bacterial two-component regulators. Acts as negative regulator of ethylene signaling. May play a role in the regulation of flowering by upregulating GI (GIGANTEA) and RCN1 and regulate starch accumulation by down-regulating the alpha- amylase AMY3D. | 0.723 |
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